First deal with deleted files.
* Files deleted by us: keep them deleted.
* Files deleted by them, whether modified by us or not: keep our version.
```
git rm $(git status -s | sed -n 's/^DU //p')
git reset -- $(git status -s | sed -n 's/^D //p')
git checkout -- $(git status -s | sed -n 's/^ D //p')
git add -- $(git status -s | sed -n 's/^UD //p')
```
Individual files with conflicts:
* `3rdparty/everest/library/Hacl_Curve25519_joined.c`: spurious conflict because git mistakenly identified this file as a rename. Keep our version.
* `README.md`: conflict due to their change in a paragraph that doesn't exist in our version. Keep our version of this paragraph.
* `docs/architecture/Makefile`: near-identical additions. Adapt the definition of `all_markdown` and include the clean target.
* `doxygen/input/docs_mainpage.h`: conflict in the version number. Keep our version number.
* `include/mbedtls/config.h`: two delete/modify conflicts. Keep the removed chunks out.
* `library/CMakeLists.txt`: discard all their changes as they are not relevant.
* `library/Makefile`:
* Discard the added chunk about the crypto submodule starting with `INCLUDING_FROM_MBEDTLS:=1`.
* delete/modify: keep the removed chunk out.
* library build: This is almost delete/modify. Their changes are mostly not applicable. Do keep the `libmbedcrypto.$(DLEXT): | libmbedcrypto.a` order dependency.
* `.c.o`: `-o` was added on both sides but in a different place. Change to their place.
* `library/error.c`: to be regenerated.
* `library/version_features.c`: to be regenerated.
* `programs/Makefile`: Most of the changes are not relevant. The one relevant change is in the `clean` target for Windows; adapt it by removing `/S` from our version.
* `programs/test/query_config.c`: to be regenerated.
* `scripts/config.py`: added in parallel on both sides. Keep our version.
* `scripts/footprint.sh`: parallel changes. Keep our version.
* `scripts/generate_visualc_files.pl`: one delete/modify conflict. Keep the removed chunks out.
* `tests/Makefile`: discard all of their changes.
* `tests/scripts/all.sh`:
* `pre_initialize_variables` add `append_outcome`: add it.
* `pre_initialize_variables` add `ASAN_CFLAGS`: already there, keep our version.
* `pre_parse_command_line` add `--no-append-outcome`: add it.
* `pre_parse_command_line` add `--outcome-file`: add it.
* `pre_print_configuration`: add `MBEDTLS_TEST_OUTCOME_FILE`.
* Several changes in SSL-specific components: keep our version without them.
* Several changes where `config.pl` was changed to `config.py` and there was an adjacent difference: keep our version.
* Changes regarding the inclusion of `MBEDTLS_MEMORY_xxx`: ignore them here, they will be normalized in a subsequent commit.
* `component_test_full_cmake_gcc_asan`: add it without the TLS tests.
* `component_test_no_use_psa_crypto_full_cmake_asan`: keep the fixed `msg`, discard other changes.
* `component_test_memory_buffer_allocator_backtrace`, `component_test_memory_buffer_allocator`: add them without the TLS tests.
* `component_test_m32_everest`: added in parallel on both sides. Keep our version.
* `tests/scripts/check-names.sh`, `tests/scripts/list-enum-consts.pl`, `tests/scripts/list-identifiers.sh`, ``tests/scripts/list-macros.sh`: discard all of their changes.
* `tests/scripts/test-ref-configs.pl`: the change in the conflict is not relevant, so keep our version there.
* `visualc/VS2010/*.vcxproj`: to be regenerated.
Regenerate files:
```
scripts/generate_visualc_files.pl
git add visualc/VS2010/*.vcxproj
scripts/generate_errors.pl
git add library/error.c
scripts/generate_features.pl
git add library/version_features.c
scripts/generate_query_config.pl
git add programs/test/query_config.c
```
Rejected changes in non-conflicting files:
* `CMakeLists.txt`: discard their addition which has already been side-ported.
* `doxygen/mbedtls.doxyfile`: keep the version number change. Discard the changes related to `../crypto` paths.
Keep the following changes after examination:
* `.travis.yml`: all of their changes are relevant.
* `include/mbedtls/error.h`: do keep their changes. Even though Crypto doesn't use TLS errors, it must not encroach on TLS's allocated numbers.
* `tests/scripts/check-test-cases.py`: keep the code dealing with `ssl-opt.sh`. It works correctly when the file is not present.
Conflict resolution:
* `scripts/config.pl`:
Take the exclusion of `MBEDTLS_PSA_CRYPTO_SE_C` from the API branch.
Take the removal of `MBEDTLS_PSA_CRYPTO_STORAGE_ITS_C` (obsolete) from
the development branch.
* `tests/scripts/all.sh`:
Multiple instances of factoring a sequence of `config.pl` calls into
a mere `config.pl baremetal` in the development branch, and a change in
the composition of `baremetal` in the API branch. In each case, take the
version from development.
* `tests/suites/test_suite_psa_crypto_slot_management.function`:
A function became non-static in development and disappeared in the API
branch. Keep the version from the API branch. Functions need to be
non-static if they're defined but unused in some configurations,
which is not the case for any function in this file at the moment.
* `tests/suites/test_suite_psa_crypto.function`:
Consecutive changes in the two branches, reconciled.
Update the storage architecture with the new features introduced for
secure element support:
* Lifetime field in key files.
* Slot number in key files for keys in a secure element.
* Transaction file (name and format).
* Persistent storage for secure element drivers (name and format).
The version number is not determined yet.
Switch to the terminology "key file identifier", as has been done in
the code.
The owner uid is now in the upper 32 bits of the key file identifier,
which facilitates namespacing.
Describe the storage format for keys and random seed in Mbed Crypto
0.1.0 released with Mbed OS 5.11, over C stdio and over ITS with
32-bit file identifiers.
Describe the proposed storage format for keys and random seed in the
future release of Mbed Crypto for Mbed OS 5.12, over C stdio and over
ITS with 64-bit file identifiers.
