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221 lines
7.4 KiB
Python
221 lines
7.4 KiB
Python
from collections import defaultdict
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import os
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from toxicity_ml_pipeline.settings.default_settings_tox import REMOTE_LOGDIR
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from toxicity_ml_pipeline.settings.default_settings_abs import LABEL_NAMES
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from toxicity_ml_pipeline.utils.absv_utils import parse_labeled_data
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from toxicity_ml_pipeline.utils.helpers import compute_precision_fixed_recall, execute_command
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from sklearn.metrics import average_precision_score, roc_auc_score
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import tensorflow as tf
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import wandb
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class NothingCallback(tf.keras.callbacks.Callback):
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def on_epoch_begin(self, epoch, logs=None):
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print("ici, ", epoch)
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def on_epoch_end(self, epoch, logs=None):
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print("fin ", epoch)
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def on_train_batch_end(self, batch, logs=None):
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print("fin de batch ", batch)
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class ControlledStoppingCheckpointCallback(tf.keras.callbacks.ModelCheckpoint):
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def __init__(self, stopping_epoch, *args, **kwargs):
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super().__init__(*args, **kwargs)
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self.stopping_epoch = stopping_epoch
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def on_epoch_end(self, epoch, logs=None):
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super().on_epoch_end(epoch, logs)
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if epoch == self.stopping_epoch:
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self.model.stop_training = True
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class SyncingTensorBoard(tf.keras.callbacks.TensorBoard):
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def __init__(self, remote_logdir=None, *args, **kwargs):
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super().__init__(*args, **kwargs)
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self.remote_logdir = remote_logdir if remote_logdir is not None else REMOTE_LOGDIR
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def on_epoch_end(self, epoch, logs=None):
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super().on_epoch_end(epoch, logs=logs)
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self.synchronize()
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def synchronize(self):
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base_dir = os.path.dirname(self.log_dir)
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cmd = f"gsutil -m rsync -r {base_dir} {self.remote_logdir}"
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execute_command(cmd)
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class GradientLoggingTensorBoard(SyncingTensorBoard):
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def __init__(self, loader, val_data, freq, *args, **kwargs):
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super().__init__(*args, **kwargs)
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val_dataset = loader.get_balanced_dataset(
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training_data=val_data, size_limit=50, return_as_batch=False
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)
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data_args = list(val_dataset.batch(32).take(1))[0]
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self.x_batch, self.y_batch = data_args[0], data_args[1]
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self.freq = freq
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self.counter = 0
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def _log_gradients(self):
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writer = self._train_writer
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with writer.as_default():
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with tf.GradientTape() as tape:
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y_pred = self.model(self.x_batch)
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loss = self.model.compiled_loss(y_true=self.y_batch, y_pred=y_pred)
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gradient_norm = tf.linalg.global_norm(tape.gradient(loss, self.model.trainable_weights))
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tf.summary.scalar("gradient_norm", data=gradient_norm, step=self.counter)
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writer.flush()
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def on_train_batch_end(self, batch, logs=None):
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super().on_batch_end(batch, logs=logs)
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self.counter += 1
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if batch % self.freq == 0:
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self._log_gradients()
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class AdditionalResultLogger(tf.keras.callbacks.Callback):
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def __init__(
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self,
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data,
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set_,
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fixed_recall=0.85,
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from_logits=False,
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dataset_transform_func=None,
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batch_size=64,
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dual_head=None,
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*args,
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**kwargs,
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):
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super().__init__(*args, **kwargs)
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self.set_ = set_
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if data is None:
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return None
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self.single_head = True
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try:
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self.labels = data.int_label.values
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except AttributeError:
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self.labels = data.to_dataframe()[LABEL_NAMES].values.astype('int')
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self.data = data.to_tf_dataset().map(parse_labeled_data).batch(batch_size)
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self.label_names = LABEL_NAMES
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else:
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self.label_names = ['']
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if dual_head:
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self.label_names = [f'{e}_label' for e in dual_head]
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self.labels = {f'{e}_output': data[f'{e}_label'].values for e in dual_head}
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self.single_head = False
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if dataset_transform_func is None:
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self.data = data.text.values
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else:
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self.data = dataset_transform_func(data, mb_size=batch_size, shuffle=False)
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finally:
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if len(self.label_names) == 1:
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self.metric_kw = {}
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else:
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self.metric_kw = {'average': None}
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self.counter = 0
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self.best_metrics = defaultdict(float)
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self.from_logits = from_logits
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print(f"Loaded callback for {set_}, from_logits: {from_logits}, labels {self.label_names}")
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if 1 < fixed_recall <= 100:
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fixed_recall = fixed_recall / 100
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elif not (0 < fixed_recall <= 100):
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raise ValueError("Threshold should be between 0 and 1, or 0 and 100")
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self.fixed_recall = fixed_recall
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self.batch_size = batch_size
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def compute_precision_fixed_recall(self, labels, preds):
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result, _ = compute_precision_fixed_recall(labels=labels, preds=preds,
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fixed_recall=self.fixed_recall)
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return result
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def on_epoch_end(self, epoch, logs=None):
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self.additional_evaluations(step=epoch, eval_time="epoch")
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def on_train_batch_end(self, batch, logs=None):
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self.counter += 1
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if self.counter % 2000 == 0:
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self.additional_evaluations(step=self.counter, eval_time="batch")
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def _binary_evaluations(self, preds, label_name=None, class_index=None):
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mask = None
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curr_labels = self.labels
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if label_name is not None:
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curr_labels = self.labels[label_name]
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if class_index is not None:
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curr_labels = (curr_labels == class_index).astype(int)
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if -1 in curr_labels:
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mask = curr_labels != -1
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curr_labels = curr_labels[mask]
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preds = preds[mask]
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return {
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f"precision_recall{self.fixed_recall}": self.compute_precision_fixed_recall(
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labels=curr_labels, preds=preds
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),
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"pr_auc": average_precision_score(y_true=curr_labels, y_score=preds),
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"roc_auc": roc_auc_score(y_true=curr_labels, y_score=preds),
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}
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def _multiclass_evaluations(self, preds):
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pr_auc_l = average_precision_score(y_true=self.labels, y_score=preds, **self.metric_kw)
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roc_auc_l = roc_auc_score(y_true=self.labels, y_score=preds, **self.metric_kw)
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metrics = {}
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for i, label in enumerate(self.label_names):
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metrics[f'pr_auc_{label}'] = pr_auc_l[i]
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metrics[f'roc_auc_{label}'] = roc_auc_l[i]
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return metrics
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def additional_evaluations(self, step, eval_time):
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print("Evaluating ", self.set_, eval_time, step)
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preds = self.model.predict(x=self.data, batch_size=self.batch_size)
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if self.from_logits:
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preds = tf.keras.activations.sigmoid(preds.logits).numpy()
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if self.single_head:
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if len(self.label_names) == 1:
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metrics = self._binary_evaluations(preds)
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else:
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metrics = self._multiclass_evaluations(preds)
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else:
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if preds[0].shape[1] == 1:
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binary_preds = preds[0]
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multic_preds = preds[1]
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else:
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binary_preds = preds[1]
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multic_preds = preds[0]
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binary_metrics = self._binary_evaluations(binary_preds, label_name='target_output')
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metrics = {f'{k}_target': v for k, v in binary_metrics.items()}
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num_classes = multic_preds.shape[1]
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for class_ in range(num_classes):
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binary_metrics = self._binary_evaluations(multic_preds[:, class_], label_name='content_output', class_index=class_)
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metrics.update({f'{k}_content_{class_}': v for k, v in binary_metrics.items()})
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for k, v in metrics.items():
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self.best_metrics[f"max_{k}"] = max(v, self.best_metrics[f"max_{k}"])
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self.log_metrics(metrics, step=step, eval_time=eval_time)
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def log_metrics(self, metrics_d, step, eval_time):
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commit = False if self.set_ == "validation" else True
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to_report = {self.set_: {**metrics_d, **self.best_metrics}}
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if eval_time == "epoch":
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to_report["epoch"] = step
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wandb.log(to_report, commit=commit)
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